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  1. This study aims to elucidate the effect and mechanism of phospholipid transfer protein (PLTP) on vascular dysfunction in DR and explore the molecular mechanism of abnormal PLTP expression based on DNA methylat...

    Authors: Chunyang Cai, Chufeng Gu, Chunren Meng, Yujie Wang, Qingquan Wei, Shuai He, Dongwei Lai, Xingyun Wang, Tengfei Wang and Qinghua Qiu
    Citation: Clinical Epigenetics 2025 17:82
  2. Diabetes ranks as the ninth leading cause of death globally, and DNA-methylation age acceleration (DNAmAA) is closely linked to lifespan. However, the impact of DNAmAA on long-term outcomes in specific populat...

    Authors: Shuang Wu, Ziyi Zhong, Yimeng Wang, Jingyang Wang, Siqi Lyu, Hongyu Liu and Yang Chen
    Citation: Clinical Epigenetics 2025 17:81
  3. Health status is closely linked to both healthcare access and utilization. While previous research has identified associations between health status and DNA methylation-based biomarkers of aging (epigenetic ag...

    Authors: Jamaji C. Nwanaji-Enwerem, Dennis Khodasevich, Nicole Gladish, Hanyang Shen, Anne K. Bozack, Saher Daredia, Belinda L. Needham, David H. Rehkopf and Andres Cardenas
    Citation: Clinical Epigenetics 2025 17:80
  4. Prenatal exposure to maternal asthma may influence DNA methylation patterns in offspring, potentially affecting their susceptibility to later diseases including asthma.

    Authors: Casper-Emil Tingskov Pedersen, Thanh T. Hoang, Jianping Jin, Anna Starnawska, Raquel Granell, Hannah R. Elliott, Anke Huels, Heather J. Zar, Dan J. Stein, Yining Zhang, Herman T. den Dekker, Liesbeth Duijts, Janine F. Felix, Júlia Sangüesa, Mariona Bustamante, Maribel Casas…
    Citation: Clinical Epigenetics 2025 17:79
  5. Epigenetic aging estimators commonly track chronological and biological aging, quantifying its accumulation (i.e., epigenetic age acceleration) or speed (i.e., epigenetic aging pace). Their scores reflect a co...

    Authors: Dmitry V. Kuznetsov, Yixuan Liu, Alicia M. Schowe, Darina Czamara, Jana Instinske, Charlotte K. L. Pahnke, Markus M. Nöthen, Frank M. Spinath, Elisabeth B. Binder, Martin Diewald, Andreas J. Forstner, Christian Kandler and Bastian Mönkediek
    Citation: Clinical Epigenetics 2025 17:78
  6. In the therapeutic landscape of colorectal cancer (CRC), chemo-resistance poses a significant and prevalent obstacle that complicates treatment efficacy and patient outcomes. Over time, cancer cells can develo...

    Authors: Zheng Yuan, Kai Fang, Xinsheng Miao, Yan Zhang, Menghui Gu, Wei Xu, Hao Li, Dawei Zhu, Jiahui Zhou, Jian Sun and Xinhua Gu
    Citation: Clinical Epigenetics 2025 17:77
  7. Recent advances in screening programs and the development of innovative therapeutic strategies have significantly improved the clinical outcomes of cancer patients. However, many patients still experience trea...

    Authors: Alessandro Lavoro, Daria Ricci, Giuseppe Gattuso, Federica Longo, Graziana Spoto, Anastasia Cristina Venera Vitale, Maria Chiara Giuliana, Luca Falzone, Massimo Libra and Saverio Candido
    Citation: Clinical Epigenetics 2025 17:76
  8. Thromboembolism is one of the most prevalent cardiovascular conditions affecting the elder population. The associations between epigenetic aging and thromboembolism risks remain incompletely elucidated. Throug...

    Authors: Bowen Jin, Yunyan Li, Dingyang Li, Chi Jing and Qunshan Sheng
    Citation: Clinical Epigenetics 2025 17:75
  9. Transformed follicular lymphoma (t-FL) is an aggressive and heterogeneous hematological malignancy with limited treatment success; the development of novel therapeutic approaches is urgently needed for patient...

    Authors: Mengya Zhong, Guangchao Pan, Jinshui Tan, Jingwei Yao, Yating Liu, Jiewen Huang, Yuelong Jiang, Depeng Zhu, Jintao Zhao, Bing Xu and Jie Zha
    Citation: Clinical Epigenetics 2025 17:74
  10. Reduced copy number of the D4Z4 macrosatellite at human chromosome 4q35 is associated with facioscapulohumeral muscular dystrophy (FSHD). A pervasive idea is that chromatin alterations at the 4q35 locus follow...

    Authors: Valentina Salsi, Francesca Losi, Monica Salani, Paul D. Kaufman and Rossella Tupler
    Citation: Clinical Epigenetics 2025 17:73
  11. Primary myelofibrosis (PMF) is a clonal blood disorder characterized by mutually exclusive driver mutations in JAK2, CALR, or MPL genes. So far, it is largely unclear if the driver mutations have a specific impac...

    Authors: Esra Dursun Torlak, Vithurithra Tharmapalan, Kim Kricheldorf, Joelle Schifflers, Madeline Caduc, Martin Zenke, Steffen Koschmieder and Wolfgang Wagner
    Citation: Clinical Epigenetics 2025 17:72
  12. Abnormal DNA methylation is a hallmark of cancer and a nearly universal feature of melanoma. DNA methylation plays well-appreciated melanoma cell-intrinsic roles, including silencing tumor-suppressor genes, re...

    Authors: Maya G. Deshmukh, Veronica T. Brooks, Simon F. Roy, Simon Milette, Marcus Bosenberg and Goran Micevic
    Citation: Clinical Epigenetics 2025 17:71
  13. Silver–Russell syndrome (SRS) is a rare congenital growth disorder which is associated with molecular alterations affecting imprinted regions on chromosome 11p15 and maternal uniparental disomy of chromosome 7...

    Authors: Matthias Begemann, Anna Lengyel, Eva Pinti, Árpád Ferenc Kovács, György Fekete, Svea Stratmann, Jeremias Krause, Miriam Elbracht, Florian Kraft and Thomas Eggermann
    Citation: Clinical Epigenetics 2025 17:70
  14. Kabuki syndrome type 1 (KS1) is a monogenic disorder arising from pathogenic variants within KMT2D and characterized by syndromic neurodevelopmental delay. We report the retrospective identification of a causativ...

    Authors: Quentin Sabbagh, Nathalie Ruiz-Pallares, Cassandra Rastin, Jacques Puechberty, Thomas Guignard, Claire Jeandel, Fanny Merklen, Pascal Pujol, Jennifer Kerkhof, Bekim Sadikovic, Mouna Barat-Houari and David Geneviève
    Citation: Clinical Epigenetics 2025 17:69
  15. Non-coding 886 (nc886, vtRNA2-1) is a polymorphically imprinted gene. The methylation status of this locus has been shown to be associated with periconceptional conditions, and both the methylation status and the...

    Authors: Sonja Rajić, Thomas Delerue, Justiina Ronkainen, Ruiyuan Zhang, Joanna Ciantar, Daria Kostiniuk, Pashupati P. Mishra, Leo-Pekka Lyytikäinen, Nina Mononen, Laura Kananen, Annette Peters, Juliane Winkelmann, Marcus E. Kleber, Stefan Lorkowski, Mika Kähönen, Terho Lehtimäki…
    Citation: Clinical Epigenetics 2025 17:68
  16. Most Beckwith–Wiedemann syndrome (BWS) cases are sporadic; nonetheless, imprinting center 1 (IC1) microdeletions have been suggested as a rare cause of familial BWS, with ~ 20 reported cases. We report 13 case...

    Authors: Qiliang Ding, Zinandre Stander, Brandon J. Elizalde, Erica S. Stelmach, Jaime C. Duncan, Noemi Vidal-Folch, Linda Hasadsri, Kandelaria M. Rumilla and Wei Shen
    Citation: Clinical Epigenetics 2025 17:67
  17. Although DNA methylation age estimators (DNAmAges) are reliable tools for predicting aging, their effectiveness in predicting mortality risk has not been fully validated. This study compared the predictive uti...

    Authors: Yun Zou, Jing Huang, Xiaoli Tang and Jixiong Xu
    Citation: Clinical Epigenetics 2025 17:66
  18. To identify nongenetic factors influences on DNA methylation (DNAm) variations associated with blood Alanine Aminotransferase (ALT) concentration, this study conducted an epigenome-wide association study (EWAS...

    Authors: Jingxian Li, Jia Luo, Tong Wang, Xiaocao Tian, Chunsheng Xu, Weijing Wang and Dongfeng Zhang
    Citation: Clinical Epigenetics 2025 17:65
  19. Dilated cardiomyopathy (DCM)-associated heart failure (HF) presents a significant clinical challenge, underlying epigenetic mechanisms remaining poorly understood. This study aims to investigate the interplay ...

    Authors: Zhenglong Guo, Yunfei Liu, Zhiming Zhou, Jianchao Chen, Lin Guo, Keke Liang, Yibin Hao, Bingtao Hao, Bin Yang and Shixiu Liao
    Citation: Clinical Epigenetics 2025 17:64
  20. The present study aimed to clarify the clinical significance of the cell-free DNA (cfDNA) methylation profile of patients with non-small cell lung cancer (NSCLC) showing the epidermal growth factor receptor (EGFR...

    Authors: Mao Fujimoto, Hiroyuki Yasuda, Eri Arai, Makoto Nakajima, Saori Takata, Kei Morikawa, Hisashi Tanaka, Hidetoshi Itani, Takeshi Honda, Kazuya Horiuchi, Kageaki Watanabe, Hideyuki Nakagawa, Yoshiro Nakahara, Yoshitaka Seki, Akihiro Bessho, Nobumasa Takahashi…
    Citation: Clinical Epigenetics 2025 17:63
  21. Biological age reflects inter-individual differences in biological function and capacity beyond chronological age. DNA methylation age (DNAmA) and its deviation from chronological age, DNAmA acceleration (DNAm...

    Authors: Valentin Max Vetter, Kamil Demircan, Jan Homann, Thilo Samson Chillon, Michael Mülleder, Orr Shomroni, Elisabeth Steinhagen-Thiessen, Markus Ralser, Christina M. Lill, Lars Bertram, Lutz Schomburg and Ilja Demuth
    Citation: Clinical Epigenetics 2025 17:62
  22. Epigenetic algorithms of aging, health, and cognition, based on DNA-methylation (DNAm) patterns, are prominent tools for measuring biological age and have been linked to age-related diseases, cognitive decline...

    Authors: Sepideh Zarandooz and Laurel Raffington
    Citation: Clinical Epigenetics 2025 17:61
  23. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19), and SARS-CoV-2 has been linked to changes in DNA methylation (DNAm) patterns. Studies focused on post-SA...

    Authors: Peizhen Hong, Melanie Waldenberger, Michael Pritsch, Leonard Gilberg, Isabel Brand, Jan Bruger, Jonathan Frese, Noemi Castelletti, Mercè Garí, Christof Geldmacher, Michael Hoelscher, Annette Peters and Pamela R. Matías-García
    Citation: Clinical Epigenetics 2025 17:60
  24. DNA methylation-based predictors of phenotypic traits including leukocyte proportions, smoking activity, biological aging, and circulating levels of plasma proteins are widely used as biomarkers in public heal...

    Authors: Dennis Khodasevich, Nicole Gladish, Saher Daredia, Anne K. Bozack, Hanyang Shen, Jamaji C. Nwanaji-Enwerem, Belinda L. Needham, David H. Rehkopf and Andres Cardenas
    Citation: Clinical Epigenetics 2025 17:59
  25. To date, various epigenetic clocks have been constructed to estimate biological age, most commonly using DNA methylation (DNAm). These include “first-generation” clocks such as DNAmAgeHorvath and “second-gener...

    Authors: Suet Mei Chew, Alexander Teumer, Pamela R. Matías‑García, Christian Gieger, Juliane Winckelmann, Karsten Suhre, Christian Herder, Wolfgang Rathmann, Annette Peters and Melanie Waldenberger
    Citation: Clinical Epigenetics 2025 17:58
  26. Sepsis is a syndrome of organ dysfunction caused by the invasion of pathogenic microorganisms. In clinical practice, patients with sepsis are prone to concurrent acute kidney injury, which has high morbidity a...

    Authors: Yuhang Yang, Xinqi Deng, Wenyuan Li, Yan Leng, Yonghong Xiong, Bihan Wang, Siyuan Gong, Yunhao Wang, Baichuan Yang and Wei Li
    Citation: Clinical Epigenetics 2025 17:57
  27. Bisulfite conversion (BC) has been the gold standard in DNA methylation profiling for decades. During this chemical process, non-methylated cytosines are converted into uracils, while methylated cytosines rema...

    Authors: Roy B. Simons, Faidra Karkala, Marta M. Kukk, Hieab H. H. Adams, Manfred Kayser and Athina Vidaki
    Citation: Clinical Epigenetics 2025 17:56
  28. Sleep disturbances are known to have adverse effects on health, but knowledge on the effect of sleep disturbances on epigenetic ageing is limited. We investigated (1) whether symptoms of insomnia, obstructive ...

    Authors: Ida Autio, Aino Saarinen, Saara Marttila, Emma Raitoharju, Pashupati P. Mishra, Nina Mononen, Mika Kähönen, Liisa Keltikangas-Järvinen, Olli Raitakari and Terho Lehtimäki
    Citation: Clinical Epigenetics 2025 17:55
  29. Circulating lipid concentrations are clinically associated with cardiometabolic diseases. The phenotypic variance explained by identified genetic variants remains limited, highlighting the importance of search...

    Authors: Yao Hu, Jeff Haessler, Jessica I. Lundin, Burcu F. Darst, Eric A. Whitsel, Megan Grove, Weihua Guan, Rui Xia, Mindy Szeto, Laura M. Raffield, Scott Ratliff, Yuxuan Wang, Xuzhi Wang, Alison E. Fohner, Megan T. Lynch, Yesha M. Patel…
    Citation: Clinical Epigenetics 2025 17:54
  30. Authors: David Martino, Nikki Schultz, Ravinder Kaur, Simon D. van Haren, Nina Kresoje, Annmarie Hoch, Joann Diray‑Arce, Jessica Lasky Su, Ofer Levy and Michael Pichichero
    Citation: Clinical Epigenetics 2025 17:53

    The original article was published in Clinical Epigenetics 2024 16:85

  31. Vitamin D is a fat-soluble vitamin that has a protective role in colorectal cancer. Several studies have identified the association between vitamin D and changes in DNA methylation in different types of tumour...

    Authors: Hongyan Sun, Liehao Yang, Nan Li, Yue Hu, Qianying Hu, Zilong Zhou and Xianling Cong
    Citation: Clinical Epigenetics 2025 17:52
  32. Immunotherapy, particularly immune checkpoint inhibitor therapy, has demonstrated clinical benefits in solid tumours. Despite its satisfactory clinical efficacy, it still faces several issues, such as limited ...

    Authors: Huan Zhang, Yutong Pang, Ling Yi, Xiaojue Wang, Panjian Wei, Haichao Wang and Shuye Lin
    Citation: Clinical Epigenetics 2025 17:51
  33. Lung adenocarcinoma (LUAD) is the most common histological subtype of lung cancer. The distinctive genetic and epigenetic modifications in tumors and paired non-malignant samples, such as adjacent peri-tumor a...

    Authors: Ying Zhou, Jing Zhang, Yang He, Yun Wang, Bing Li, Tengfei Zhu and Yanjun Su
    Citation: Clinical Epigenetics 2025 17:50
  34. Disorders of the reproductive system, including hypogonadism and reduced fertility, are an under-recognized complication of diabetes. Based on experimental data in mice, hyperglycemia and obesity may modify ep...

    Authors: Lei Su, Jonathan M. Dreyfuss, Rafael Ferraz Bannitz, Danielle Wolfs, Georgia Hansbury, Lauren Richardson, Charnice Charmant, Jay Patel, Elizabeth S. Ginsburg, Catherine Racowsky, Ruby Fore, Vissarion Efthymiou, Jessica Desmond, Allison Goldfine, Anne Ferguson-Smith, Hui Pan…
    Citation: Clinical Epigenetics 2025 17:49
  35. Signal transduction plays a pivotal role in modulating a myriad of critical processes, including the tumour microenvironment (TME), cell cycle arrest, proliferation and apoptosis of tumour cells, as well as th...

    Authors: Weiyu Su, Weiwen Wang, Guanghui Zhang and Lianhe Yang
    Citation: Clinical Epigenetics 2025 17:48
  36. Methylation profiling of central nervous system (CNS) tumors, pioneered by the German Cancer Research Center, has significantly improved diagnostic accuracy. This study aimed to further enhance the performance...

    Authors: Kwanghoon Lee, Jaemin Jeon, Jin Woo Park, Suwan Yu, Jae-Kyung Won, Kwangsoo Kim, Chul-Kee Park and Sung-Hye Park
    Citation: Clinical Epigenetics 2025 17:47
  37. Past experiences of maltreatment and life adversity induce DNA methylation changes in adults, but less is known about their impact on mothers’ maladaptive neglectful parenting and its negative effects. We perf...

    Authors: Inmaculada León, Daylín Góngora, María José Rodrigo, Silvia Herrero-Roldán, Maykel López Rodríguez, Colter Mitchell, Jonah Fisher and Yasser Iturria-Medina
    Citation: Clinical Epigenetics 2025 17:46
  38. Methylation changes linked to dilated cardiomyopathy (DCM) affect cardiac gene expression. We investigate DCM mechanisms regulated by CpG methylation using multi-omics and causal analyses in the largest cohort...

    Authors: Konstanze Tan, Darwin Tay, Wilson Tan, Hong Kiat Ng, Eleanor Wong, Michael P. Morley, Gurpreet K. Singhera, Chang Jie Mick Lee, Pritesh R. Jain, Fei Li Tai, Paul J. Hanson, Thomas P. Cappola, Kenneth B. Margulies, Roger Foo and Marie Loh
    Citation: Clinical Epigenetics 2025 17:45
  39. The microalga Aphanizomenon flos-aquae (AFA) has garnered attention for its potential therapeutic benefits in various health conditions, primarily through its use in nutraceutical formulations. While biological e...

    Authors: Flores Naselli, Sara Volpes, Paola Sofia Cardinale, Sabrina Micheli, Adele Cicio, Gabriel Dylan Scoglio, Roberto Chiarelli, Maria Grazia Zizzo, Pasquale Picone, Fabio Caradonna and Domenico Nuzzo
    Citation: Clinical Epigenetics 2025 17:44
  40. Prostate cancer is the second most common cancer globally, with radiation therapy (RT) being a key treatment for clinically localized and locally advanced cases. Given high survival rates, addressing long-term...

    Authors: Carlos Lopez-Pleguezuelos, Miguel E. Aguado-Barrera, Ana Carballo-Castro, Paula Peleteiro, Patricia Calvo-Crespo, Begoña Taboada-Valladares, Ramón Lobato-Busto, Olivia Fuentes-Ríos, Javier Galego-Carro, Carla Coedo-Costa, Antonio Gómez-Caamaño and Ana Vega
    Citation: Clinical Epigenetics 2025 17:43
  41. Ribosome biogenesis (RiboSis) is a complex process for generating ribosomes, the cellular machinery responsible for protein synthesis. Dysfunctional RiboSis can disrupt cardiac structure and function, contribu...

    Authors: Shuxu Wei, Ronghuai Shen, Xiaojia Lu, Xinyi Li, Lingbin He, Youti Zhang, Jiahang Yang, Zhouwu Shu and Xianxi Huang
    Citation: Clinical Epigenetics 2025 17:42
  42. DNA methylation (DNAm) has a functional role in gene regulation, and it has been used to estimate various human characteristics. Variation in DNAm is associated with aging and variability of the proteome. Ther...

    Authors: Thaís Lopes De Oliveira, Arianna March, Jonathan K. L. Mak, Nancy L. Pedersen and Sara Hägg
    Citation: Clinical Epigenetics 2025 17:41
  43. Tobacco and alcohol are recognized risk factors for heart disease, yet their causal effects on electrocardiogram (ECG) signaling and mechanisms remain unclear. Previous studies may be susceptible to confoundin...

    Authors: Zequn Zheng, Yongfei Song, Xinhan Li, Tao Luo and Xuerui Tan
    Citation: Clinical Epigenetics 2025 17:40
  44. Human T-cell lymphotropic virus type 1 (HTLV-1) infection causes the uncommon and deadly cancer known as adult T-cell leukemia/lymphoma (ATLL), which affects mature T cells. Its clinical appearance is varied, ...

    Authors: Arash Letafati, Rabeeh Mehdigholian Chaijani, Fahime Edalat, Nazila Eslami, Hanieh Askari, Farideh Askari, Sara Shirvani, Hamed Talebzadeh, Mahdiyeh Tarahomi, Nila MirKhani, Faeze Karimi, Mehdi Norouzi and Sayed‑Hamidreza Mozhgani
    Citation: Clinical Epigenetics 2025 17:39
  45. Currently, the non-invasive diagnostic methods for nasopharyngeal carcinoma (NPC) continue to grapple with the challenge of low sensitivity. The hypermethylation of tumor suppressor genes is an established ear...

    Authors: Xiao-Yan Fu, Zi-Ying Zhou, Teng-Yue Yang, Ying-Juan Wen, Da-Bo Liu, Yi-Bo Zhou, Yuan Yue, Fei Ye and Zhong-Xi Huang
    Citation: Clinical Epigenetics 2025 17:38
  46. Breast cancer has constantly been the leading causes of death in women, and hormone receptor (HR) positive, HER2 negative is the majority subtype. Histone deacetylase (HDAC) inhibitors (HDACi) have shown clini...

    Authors: Ting-I Lin, Yi-Ru Tseng, Min-Jyun Dong, Chih-Yi Lin, Wei-Ting Chung, Chun-Yu Liu, Yi-Fang Tsai, Chi-Cheng Huang, Ling-Ming Tseng, Ta-Chung Chao and Jiun-I Lai
    Citation: Clinical Epigenetics 2025 17:37
  47. To validate the clinical utility of a previously identified circulating tumor DNA methylation marker (meth-ctDNA) panel for disease detection and survival outcomes, meth-ctDNA markers were compared to PSA leve...

    Authors: Kilian Kluge, Vincent Lotz, Holger Einspieler, David Haberl, Clemens Spielvogel, Dominik Amereller, Gero Kramer, Bernhard Grubmüller, Shahrokh Shariat, Alexander Haug, Marcus Hacker, Lukas Kenner and Gerda Egger
    Citation: Clinical Epigenetics 2025 17:36
  48. Epigenetics is currently considered the investigation of inheritable changes in gene expression that do not rely on DNA sequence alteration. Significant epigenetic procedures are involved, such as DNA methylat...

    Authors: Azar Tahghighi, Effat Seyedhashemi, Javad Mohammadi, Arash Moradi, Aria Esmaeili, Majid Pornour, Kimia Jafarifar and Shahla Mohammad Ganji
    Citation: Clinical Epigenetics 2025 17:34
  49. Social epigenomics research investigates links between social experiences and epigenetic modifications, which may ultimately impact health. Such research holds promise for precision medicine and addressing hea...

    Authors: Courtney Berrios, Tammy Basey, Andrea Bradley-Ewing, Stacey Daniels-Young, Daysha Lewis, Keith Feldman, Mary E. Moffatt, Tomi Pastinen and Elin Grundberg
    Citation: Clinical Epigenetics 2025 17:33