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Table 1 Clinical features and molecular findings of the 13 individuals with IC1 microdeletions in our cohort

From: Thirteen cases support the clinical significance of imprinting center 1 (IC1) microdeletions in Beckwith–Wiedemann syndrome

Individual

Family

Age

IC1 Methylation

Parent-of-origin of the Allele Harboring Deletion

Deletion Type

Breakpoints1 (Fused Repeat Blocks)

Clinical Information

1

1

5 w

Hypermethylation

Maternal

1.8-kb

11:2,022,152–2,023,984

(B6/B3)

Increased birth weight, macroglossia, umbilical hernia

2

36 y

Borderline hypermethylation

Maternal

Mother of Patient 1; increased birth weight, no additional features of BWS

3

31 y

Hypermethylation

Maternal

Maternal uncle of Patient 1; clinical diagnosis of BWS, Wilms tumors

4

64 y

Normal

Unknown2

Maternal grandmother of Patient 1; unaffected

5

2

15 m

Hypermethylation

Maternal

1.8-kb

11:2,022,100–2,023,933

(B6/B3)

Clinical diagnosis of BWS

6

29 y

Normal

Unknown2

Mother of Patient 5; no clinical information provided

7

3

0 d

Hypermethylation

Maternal

1.8-kb

11:2,022,337–2,024,168

(B7/B3)3

Macrosomia, organomegaly (kidneys), hypoglycemia; patient has a family history of BWS (mother and sister reportedly tested positive for IC1 microdeletion at an external institution; however, no clinical information or IC1 methylation status were provided)

8

4

7 m

Hypermethylation

Unknown

(de novo)

1.4-kb

11:2,022,160–2,023,591

(B5/B3)

Testing ordered by a pediatric oncologist; de novo (both parents tested negative for IC1 microdeletion)

9

5

10 m

Hypermethylation

Unknown2

2.2-kb

11:2,021,975–2,024,214

(B7/B3)

Early excess growth, macrosomia, organomegaly (kidneys, liver), facial dysmorphism, macroglossia

10

6

70 y

Hypermethylation

Unknown2

2.2-kb

11:2,021,616–2,023,855

(B6/B2)

Macroglossia, ear creases, rule out organomegaly

11

7

0 d

Hypermethylation

Unknown2

1.8-kb

11:2,022,337–2,024,168

(B7/B3)3

No clinical information provided

12

8

41 y

Hypermethylation

Unknown2

1.4-kb

11:2,021,940–2,023,372

(B5/B3)

Clinical diagnosis of BWS, lower limb asymmetry, macroglossia, omphalocele, overgrowth, history of tumors/masses

13

9

4 y

Borderline hypermethylation

Unknown2

2.2-kb

11:2,021,718–2,023,957

(B6/B2)

Increased birth weight, hypotonia since birth, protruding tongue, large multi-focal left-sided renal mass, right upper lobe pulmonary nodule

  1. d days, w weeks, m months, y years
  2. 1Coordinates are in GRCh37/hg19; repeat block information from[18]
  3. 2The parent-of-origin and inheritance status were unknown due to the lack of parental samples
  4. 3The 5’-breakpoint of this deletion was between repeat blocks B3 and B4