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Table 2 Overview on the patients with chromosome 7 disturbances included in this study, and the analysed tissues and conducted tests

From: Maternal uniparental disomy of chromosome 7: how chromosome 7-encoded imprinted genes contribute to the Silver–Russell phenotype

Patients

GRB10Del

UPD7M

UPD7qM

GRB10GOM

Molecular disturbance

Deletion in GRB10

Maternal UPD of whole chromosome 7

Maternal UPD of chromosome 7qter, LOM of MEG3:TSS DMR

GOM of GRB10:alt-TSS DMR and 20q13 deletion

Number

2 (twins)

3

1

1

tissue for DNA testing

blood

blood

fibroblasts

blood

DNA tests

(MS-)MLPA

CytoScan™ HD Array

GS

MS-MLPA

MS-MLPA

MS-MLPA

CytoScan™ HD Array

GS

Tissue for RNA analysis

blood

fibroblasts

fibroblasts

NA

RNA assays

RNAseq

RNAseq (triplicates)

qPCR (triplicates)

RNAseq (triplicates)

qPCR (triplicates)

NA

  1. UPD uniparental disomy; LOM loss of methylation; GOM gain of methylation; GS genome sequencing.