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Table 3 Significant DMRs Associated with Late Severe GI and GU Adverse Effects

From: Epigenome-wide analysis reveals potential biomarkers for radiation-induced toxicity risk in prostate cancer

Chr

Starta

Enda

width (bp)

no.CpGs

Gene region

p-valueb

Overlapping genes

chr11

131,630,464

131,630,648

185

3

1st exon

0.002

NTMc

chr17

7,253,189

7,254,443

1255

10

19th, 20th, 21st exon–intron

0.006

ACAP1d

chr2

102,803,738

102,803,787

50

3

1st exon

0.015

IL1RL2c

chr13

23,309,689

23,310,675

987

10

IR

0.018

–c

chr7

55,516,724

55,516,872

149

3

2nd intron

0.023

VOPP1c

chr10

4,867,773

4,868,398

626

11

promotor + 1st exon

0.032

AKR1E2c

  1. Chr chromosome, no.CpGs number of CpGs in the region, IR intergenic region
  2. aGRCh37
  3. bFisher’s exact test
  4. cHypermethylation in cases versus controls
  5. dHypomethylation in cases versus controls