Table 5 Top 20 meQTL’s observed in PSC
| Â | SNPs | IlluminaID | P. Val | Adj. P. Val | Chr | Gene |
|---|---|---|---|---|---|---|
1 | rs375984 | cg26021304 | 9.48E-82 | 7.86E-77 | 6 | ZFP57 |
2 | rs9268839 | cg11294950 | 9.57E-82 | 7.86E-77 | 6 | Â |
3 | GSA-rs7193473 | cg05477582 | 1.08E-80 | 7.35E-76 | 16 | CMTM1 |
4 | rs1883847 | cg09864671 | 1.41E-80 | 8.25E-76 | 20 | DIDO1 |
5 | rs8019916 | cg23022053 | 1.48E-78 | 7.59E-74 | 14 | PTGDR |
6 | rs4148943 | cg05125667 | 2.93E-77 | 1.34E-72 | 10 | CHST3 |
7 | GSA-rs36178 | cg07068406 | 4.37E-77 | 1.79E-72 | 3 | EPHB1 |
8 | GSA-rs11175307 | cg11601920 | 3.74E-76 | 1.40E-71 | 12 | C12orf56 |
9 | rs1997243 | cg03916490 | 9.93E-74 | 2.16E-69 | 7 | C7orf50 |
10 | rs9268127 | cg13966843 | 1.21E-73 | 2.16E-69 | 6 | C6orf10 |
11 | rs3117582 | cg23634079 | 1.69E-72 | 1.98E-68 | 6 | MSH5 |
12 | rs798544 | cg24648384 | 3.54E-72 | 4.04E-68 | 7 | GNA12 |
13 | rs1997243 | cg22785556 | 2.41E-71 | 2.67E-67 | 7 | C7orf50 |
14 | rs9977496 | cg16536985 | 5.24E-70 | 5.20E-66 | 21 | Â |
15 | rs1023449 | cg07389699 | 5.45E-70 | 5.20E-66 | 6 | HLA-DQB2 |
16 | rs2015845 | cg17406915 | 1.47E-68 | 1.31E-64 | 19 | Â |
17 | rs3095152 | cg04559908 | 2.45E-68 | 2.05E-64 | 6 | DPCR1 |
18 | rs2523607 | cg22731440 | 2.24E-66 | 1.74E-62 | 6 | HLA-B |
19 | rs929157 | cg05074385 | 5.10E-66 | 3.37E-62 | 6 | TRIM15 |
20 | rs9268839 | cg13081526 | 3.32E-65 | 2.06E-61 | 6 | Â |