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Table 1 Datasets and samples used in this study

From: Genome-wide DNA methylation analysis reveals a unique methylation pattern for pleural mesothelioma compared to healthy pleura and other lung diseases

Dataset

CP

LCNEC

LAN

LUAD

LUCA

LUSC

PL

PM

TOTAL

Own data

      

29

11

 

EGAD00010001720 [24]

 

20

  

56

    

EGAD00010002053 [23]

      

3

130

 

GSE114989 [60]

  

7

27

     

GSE124052 [61]

     

25

   

GSE126043 [62]

   

9

 

6

   

GSE158422 [63]

  

37

  

37

   

GSE164269 [19]

       

79

 

GSE175769 [64]

       

10

 

GSE180060 [65]

   

27

     

GSE203061 [11]

7

  

28

 

9

 

32

 

TOTAL

7

20

44

91

56

77

32

262

589

After QC filtering

7

20

44

90

56

77

32

257

583

  1. Bold indicates the total numbers are given before filtering and after QC filtering
  2. CP, Chronic pleuritis; LAN, Lung adjacent normal; LCNEC, Large Cell Neuroendocrine Carcinoma of the Lung; LUAD, Lung adenocarcinoma; LUCA, Lung carcinoid; LUSC, Lung squamous cell carcinoma; PL, Pleura; PM, Pleural Mesothelioma
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Clinical Epigenetics

ISSN: 1868-7083

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