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Table 1 Associations of BRCA DNA-methylation and clinicopathological and genetic features

From: BRCA loss of function including BRCA1 DNA-methylation, but not BRCA-unrelated homologous recombination deficiency, is associated with platinum hypersensitivity in high-grade ovarian cancer

Variable

  

BRCA-methylation§

BRCA-LOF by epigenetic or genetic aberrations

Total

No

Yes

P value

No

Yes

P value

Age

 ≤ 59.8 years

66

57

9

0.271

21

45

0.007

 > 59.8 years

65

60

5

 

36

29

 

FIGO stage

I/II

15

14

1

0.592

5

10

0.398

III/IV

116

103

13

 

52

64

 

Tumor grade

2

54

50

4

0,309

25

29

0.590

3

77

67

10

 

32

45

 

Residual disease

Macroscopically tumor-free or < 1 cm

91

83

8

0.244

44

47

0.080

Any tumor residual (> 1 cm)

38

32

6

 

12

26

 

n.a

2

–

–

 

–

–

 

Histology

HGSOC

114

102

12

0.877

50

64

0.835

HGEOC

17

15

2

 

7

10

 

BRCA genetic aberrations

Wild-type

70

57

13

0.002

57

13

 < 0.001

Mutation (BRCA1; BRCA2)

61 (45; 16)

60 (45; 15)

1 (0; 1)

 

0

61 (45;16)

 

HRD

Low (< 1.77)

44

42

2

0.092

41

3

 < 0.001

High (> 1.77)

76

65

11

 

15

61

 
  1. The significance level (P) was determined by Chi Square analysis
  2. Bold values indicate P-values < 0.05; the numbers in italics represent the specific data for BRCA1 and BRCA2 mutations
  3. §BRCA1 DNA methylation; BRCA2 DNA methylation was not detected
  4. FIGO International Federation of Gynecology and Obstetrics; HGEOC high-grade endometrioid ovarian cancer; HGSOC high-grade serous ovarian cancer; HRD homologous recombination deficiency; LOF loss of function; n.a. not available